Bone Marrow Macrophage Array

Heatmap of a gene set

Paste genes, choose how to lay out the columns, and draw. Rows are genes — click a gene label to open its kinetics.

Compare two conditions

Each condition is a stimulus at a timepoint. Fold change = B − A (log₂). This array has one sample per condition, so it reports fold change only — no p-values.

Tap/hover a point to identify it · tap again (or click) to pin its label · +/− or drag a box to zoom, Reset to go back · type in the filter below to highlight genes on the plot.

Click a gene to open its kinetics · hover a row to highlight it on the plot.

About this dataset

Genome-wide expression profiling of primary bone-marrow-derived macrophages stimulated with innate-immune ligands and cytokines, sampled as a time-course. Everything runs locally in this one file — nothing is uploaded.

Stimuli & timepoints

Reading the data. Values are log₂-scale normalized microarray intensities. A change of +1 = doubling. On the Kinetics tab, “anchor at unstim (t=0)” prepends the unstimulated value so every line starts from the same baseline. The Compare tab reports log₂ fold change only, because each stimulus×timepoint is a single array (no replicates) — treat rankings as exploratory.

Genotype. All samples here are wild-type (WT); the genotype prefix has been dropped from the labels.